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BioRuby
BioRuby 2.0.0   
... project is supported by University of Tokyo (Human Genome Center), Kyoto University (Bioinformatics Center) and the Open ... Ruby programming language. BioRuby has components for sequence analysis, pathway analysis, protein modelling and phylogenetic analysis; it ...
Open Source

Unipro UGENE 64-bit
Unipro UGENE 64-bit 50.0   
... visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. Features: ... structure prediction using GOR IV and PSIPRED; Phylogenetic analysis with Phylip; Search for restriction enzymes and integration ...
Freeware

Staden
Staden 2.0.0b11   
... DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows. Features: Sequence assembly (gap4/gap5) DNA/Protein analysis (spin) Sequence alignment Genome viewer April ...
Open Source

sRNA Workbench
sRNA Workbench 4.5.1   
... UEA sRNA Toolkit that will perform a complete analysis of single or multiple-sample sRNA datasets from both ... their precursors from an sRNA dataset and a genome. SiLoCo (Short interfering RNA Locus Comparison): compares sRNA ...
Freeware

Seq Monk
Seq Monk 0.24.1   
... · Creation of data groups for visualisation and analysis · Visualisation of mapped regions against an annotated genome. · Flexible quantitation of the mapped data to allow comparisons between data sets · Statistical analysis of data to find regions of interest · ...
Open Source

Portable UGENE
Portable UGENE 52.0   
... range of bioinformatics tools, including sequence alignment, phylogenetic analysis, and molecular modeling. It supports various file formats, ... streamlines repetitive tasks and ensures reproducibility in data analysis. 6. **Extensibility:** UGENE supports plugin extensions, enabling ...
Open Source

Geneious PRO x64
Geneious PRO x64 6.0.4   
... publications, etc. It features sequence alignment and phylogenetic analysis, contig assembly, primer design and cloning, access to ... that Geneious Pro can do for you. Sequence Analysis: * Pairwise and multiple sequence alignment including ...
Trialware | $249.00

GNomEx
GNomEx 5.3.2   
GNomEx is Genomic LIMS and Analysis Project Center designed by the Huntsman Cancer Institute for use by microarray and next generation sequencing core facilities and large research laboratories. KWs: Illumina, ...
Open Source

GiTools
GiTools 2.2.2   
Gitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools allows to import data directly from IntOGen and Biomart. ...
Freeware

SiBELia x64
SiBELia x64 3.0.6   
... will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. ... (2) regions that present in one group of genomes but not in others, (3) rearrangements that transform ...
Open Source

Unipro UGENE
Unipro UGENE 52.0   
... comprehensive bioinformatics software suite designed to facilitate the analysis and visualization of biological data. This open-source platform ... core strengths is its extensive toolkit for sequence analysis. It offers robust features for sequence alignment, assembly, ...
Open Source

PedScope x64
PedScope x64 2.3.01   
... standalone Windows and Mac application for advanced pedigree analysis, with applications in captive breeding programmes for endanged ... number of founder equivalents, the number of founder genome equivalents, and the effective number of ancestors, for ...
Trialware | $299.00
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