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Advanced Pathway Painter
Advanced Pathway Painter 2.31   
... any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the ... experiment data is done over the gene or protein names and their accession numbers. Furthermore the user ...
Freeware
tags: pathway, kegg, genmapp, biocarta, biology, bioinformatics, bioscience, affymetrix, microarray, experiment, analysis, analyse, ncbi, sequence, protein, gene, annotation

GENOM 2005
GENOM 2005 3.42   
... database references (GeneOntology, InterPro, SwissPROT ,ENSEMBL, GeneBank...), multiple analysis methods (cluster, Support-Vector-Machine, statistical methods), automatic pathway mapping ... friendly drag and drop operation), function prediction, Sequence analysis and many things more. ...
Demo | $1 637.00
tags: affymetrix, microarray, pathway, function prediction, probeset, kegg, genmapp, biocarta, biology, bioscience, analyse, ncbi, sequence, dna, protein

Unipro UGENE 64-bit
Unipro UGENE 64-bit 50.0   
... a free visual software solution for DNA and protein sequence analysis. UGENE provides customizable tools for visualization, analysis, annotation of genetic sequences. Features: ... capabilities; Queries to NCBI BLAST and CDD databases; Protein secondary structure prediction using GOR IV and PSIPRED; ...
Freeware
tags: DNA x64, education x64, visual software x64, analyze x64, genetic x64, genome analyzer, genome analysis, sequence alignment

Staden
Staden 2.0.0b11   
... DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows. Features: Sequence assembly (gap4/gap5) DNA/Protein analysis (spin) Sequence alignment Genome viewer April ...
Open Source
tags: DNA, Gap4, Gap5, Spin, trev, ancillary tools, Staden Package

Melanie
Melanie 9.2.2   
... flexible interface for the comprehensive visualization, exploration and analysis of 2D gel data. It provides powerful and ... to shorten the path from data acquisition to protein information, both for conventional 2-DE and DIGE (Fluorescence ...
Trialware
tags: Gel Analysis, Analyze Gel, 2D Gel, Gel, Analyzer, Analysis

Gene Runner
Gene Runner 6.5.49 Beta   
... data is also be used with the 'Protein Analysis' functions, the 'Suppressor' and the 'Translation Tables'. This ... can fully adjust their values. With the 'Oligo Analysis' function, users can select a small section, of ...
Freeware
tags: DNA analysis, analyze sequence, gene analysis, analyzer, sequence, analyze, DNA

raxmlGUI
raxmlGUI 2.0.16   
... wide range of input data formats, including DNA, protein sequences, and binary data, making it versatile for ... select appropriate models of evolution, and customize their analysis parameters with just a few clicks. The GUI ...
Open Source
tags: raxmlGUI, download raxmlGUI, raxmlGUI free download, phylogenetic analysis, Bio-Informatics tool, phylogenetic analyzer, analyze, analyzer, analysis, phylogenetic

Kappa screenshot
Kappa 4.321.10549   
... simplx is for simulation, complx is for static analysis. A domain-specific language that allows the expression or protein interactions that can be used to build executable ...
Open Source
tags: create rule, simulate protein interaction, protein static analysis, rule, create, analyze

BioRuby
BioRuby 2.0.0   
... Ruby programming language. BioRuby has components for sequence analysis, pathway analysis, protein modelling and phylogenetic analysis; it supports many widely used data formats and ...
Open Source
tags: bioinformatics library, bioinformatics development, ruby library, bioinformatics, library, develop

DNAssist
DNAssist 3.11   
... window to the top, and selecting the required analysis from the menu. All analyses can also be ... conversion of DNA to a RNA or a protein sequence The conversion of RNA to a DNA ...
Freeware
tags: DNAssist, DNA Analyzer

Portable UGENE
Portable UGENE 52.0   
... range of bioinformatics tools, including sequence alignment, phylogenetic analysis, and molecular modeling. It supports various file formats, ... streamlines repetitive tasks and ensures reproducibility in data analysis. 6. **Extensibility:** UGENE supports plugin extensions, enabling ...
Open Source
tags: Portable UGENE, download Portable UGENE, Portable UGENE free download, genome analysis, DNA sequencing program, Bioinformatics analyzer, Bioinformatics, genome, analyzer, analyze

miRPI screenshot
miRPI 1.0   
... of 20-24 nucleotide length that regulate gene and protein expression in plants and animals. MiRNAs have so far been identified mostly by specific cloning of small RNA molecules, complemented by ...
Freeware
tags: find conserved miRNA, conserved miRNA finder, search conserved miRNA, analyze, analysis, find

Geneious PRO x64
Geneious PRO x64 6.0.4   
... exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis, contig assembly, primer design and cloning, access to NCBI and UniProt, BLAST, protein structure viewing, automated PubMed searching, and more. It ...
Trialware | $249.00
tags: x64 molecular biology, x64 biochemistry research, x64 molecular research, x64 bioinformatics, x64 biology, x64 research

Geneious Basic x64
Geneious Basic x64 6.0.4   
... cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows any molecular biologist ... alignment and tree-building, and includes functions for extracting protein translations, sequence analysis and 3D structure visualization. ...
Freeware
tags: x64 molecular biology, x64 biochemistry research, x64 molecular research, x64 bioinformatics, x64 biology, x64 research

Cytoscape x64
Cytoscape x64 3.10.0   
... it is a general platform for complex network analysis and visualization. Cytoscape x64 core distribution provides a ... a set of custom annotation terms for your proteins, create a set of confidence values for your ...
Open Source
tags: x64 molecular interaction network, x64 molecule visualization, x64 bioinformatics viewer, x64 visualization, x64 molecule, x64 Biology

GProX screenshot
GProX 1.1.16   
... available complete software platform for comprehensive and integrated analysis and visualization of large proteomics datasets. The program provides a range of functions for data analysis. User-friendly program layout: · Spreadsheet data ...
Open Source
tags: analysis protein, visualize protein analysis, retrieve protein annotation, analyze, analysis, protenin

SearchGUI
SearchGUI 4.3.14   
... by the PeptideShaker Team, designed to streamline the analysis and interpretation of proteomics data. This powerful tool ... its intuitive user interface, which simplifies complex data analysis processes. The interface is designed to be user-friendly, ...
Open Source
tags: SearchGUI, download SearchGUI, SearchGUI free download, protein identification, peptide search engine, search engine GUI, protein, identification, peptide, search

Unipro UGENE
Unipro UGENE 52.0   
... comprehensive bioinformatics software suite designed to facilitate the analysis and visualization of biological data. This open-source platform ... core strengths is its extensive toolkit for sequence analysis. It offers robust features for sequence alignment, assembly, ...
Open Source
tags: Unipro UGENE, download Unipro UGENE, Unipro UGENE free download, genome analyzer, genome analysis, sequence alignment, genome, analyzer, HMM, builder

Jalview
Jalview 2.11.4.0   
... Dundee, stands as a premier tool for the analysis and visualization of multiple sequence alignments. This versatile ... in comprehensive bioinformatics workflows. Users can perform phylogenetic analysis, secondary structure prediction, and even access protein 3D ...
Open Source
tags: Jalview, Jalview free download, download Jalview, sequence alignment, visualization, biology, phylogenetic analysis, multiple alignment editor, University of Dundee, bioinformatics, sequence, molecular biology, molecule, protein, sequence analyzer
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