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MOPlot
MOPlot 1.93   
... according to the geometry definition in the calculation. Molecules can be turned in all directions under mouse ... displacement vectors and in animated form. For complex molecules where the calculation of the displacements may become ...
Freeware
tags: molecular orbital plotting, compute geometric parameters, molecular orbitals, visualization, molecule, orbital

PyMOL
PyMOL 3.0.3   
... file, ensuring that every object position, atom color, molecule representation, molecular state, frame, and movie can be ... VIEW 3D Molecular Structures RENDER Figures Artistically ANIMATE Molecules Dynamically EXPORT PyMOL Geometry PRESENT 3D Data with ...
Shareware | $99.00
tags: molecular visualization, molecular model, 3D molecular structure, molecular, visualization, structure

Avogadro
Avogadro 1.2.0   
... by using the mouse buttons and dragging the molecules on their three axis. Probably the best aspect of this program for those with some coding knowledge is that it can ...
Freeware
tags: molecular modeling, material science, computational chemistry, molecule, molecular, edit

Zeus
Zeus 1.5   
A powerful molecular visualisation tool supporting PDB/Brookhaven, MOL, MOL2/SYBYL and XYZ file formats. It incorporates a sophisticated rendering engine that can output very high quality molecular graphics. Zeus incorporates Sequence Search/Highlighting ...
Freeware
tags: PDB, peptide, protein, dna, nucleic acid, residues, molecular, viewer, molecule, atoms, visualisation

CHEMIX School
CHEMIX School 15.1   
**CHEMIX School: A Comprehensive Tool for Chemistry Education** Developed by Arne Standnes, CHEMIX School is an innovative and versatile software designed to enhance the learning experience in chemistry education. Tailored ...
Trialware
tags: CHEMIX School, download CHEMIX School, CHEMIX School free download, educational tool, learn chemistry, molecular 3D viewer, chemistry, learn, calculator, molecule

LeoMonteCrystal
LeoMonteCrystal 1.1   
... of the elements define 3D location of the molecule on the surface of the crystal. Relative probabilities to accept or emit molecule are calculated on the base of model of ... activated reaction depending on near surrounding of each molecule on the surface that allows direct introducing of ...
Commercial | $124.95
tags: crystal, growth, simulation, stereo, monte carlo

ACD/ChemSketch screenshot
ACD/ChemSketch 2021.2.2   
ACD/ChemSketch Freeware is a popular and comprehensive chemical drawing package, intended for home and educational use only. Since 1998, ACD/Labs has provided ChemSketch freeware to >330 academic institutions worldwide. Every day ...
Freeware
tags: chemical, structure, drawing, chemical sketch, chemical structure, draw molecule, chemistry, molecule, refraction, carbon

LigandScout
LigandScout 3.12   
... linked to 3D interface · Fast alignment of molecules in their bio-active conformation to other molecules and 3D pharmacophores from several ligands and/or pharmacophores, ... action · Advanced handling of co-factors, ions, water molecules and covalently bound ligands · Pharmacophore export to ...
Trialware
tags: Pharmacophore Modeling, 3D chemical model, Pharmacophore export, Pharmacophore, chemical model, molecule

Gabedit
Gabedit 2.5.1   
... advanced "Molecule Builder" allows to rapidly sketch in molecules and examine them in 3D. Graphics can be ... XYZ axes and the principal axes of the molecule. Animation of the normal modes corresponding to vibrational ...
Open Source
tags: chemistry package, molecule specification, molecule builder, chemistry, package, molecule

VEGA ZZ
VEGA ZZ 3.2.3.28   
... 16.777.216 colors). Cluster rendering (WireGL). 3D molecule view: wireframe with multivector bonds, CPK, ball & ... Enhanced atom coloring methods: atom, residue, chain, segment, molecule, constraints and custom. Atom selection & picking. ...
Freeware
tags: molecular model, solvent cluster, atom model, molecule, atom, chemistry

Marvin Suite
Marvin Suite 25.1.58   
... templates and symbols facilitate the rapid construction of molecules, reactions, and mechanisms. The software supports a wide ... Marvin Suite also includes MarvinView, a dynamic molecule viewer that provides detailed visualizations of chemical structures ...
Trialware
tags: Marvin Suite, download Marvin Suite, Marvin Suite free download, create molecule structure, molecule structure checker, 3D molecule viewer, Chemistry, molecule, structure, atom

Build a Molecule
Build a Molecule 1.0.22   
"Build a Molecule" is an engaging and educational software developed by ... its drag-and-drop interface, which enables users to assemble molecules from a variety of atoms. This hands-on approach ... One of the standout aspects of "Build a Molecule" is its real-time feedback mechanism. As users construct ...
Open Source
tags: chemistry, Learn Chemistry, PhET, Chemistry, Create Molecule, Simulation, Molecule, download Build a Molecule, Build a Molecule, education, interactive, Build Molecule, Atom, molecules, simulation, Build a Molecule free download

JChem Suite
JChem Suite 25.1.0   
... conventions, making it versatile enough to handle complex molecules and reactions with ease. JChem Suite also excels in its ability to perform sophisticated chemical calculations and predictions. The suite ...
Demo
tags: JChem Suite, download JChem Suite, JChem Suite free download, modify molecule, edit compound, Chemistry database, Chemistry, molecule, atom, compound

Jalview
Jalview 2.11.4.0   
Jalview, a sophisticated bioinformatics software developed by the University of Dundee, stands as a premier tool for the analysis and visualization of multiple sequence alignments. This versatile application is designed to ...
Open Source
tags: Jalview, Jalview free download, download Jalview, sequence alignment, visualization, biology, phylogenetic analysis, multiple alignment editor, University of Dundee, bioinformatics, sequence, molecular biology, molecule, protein, sequence analyzer
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